CDS

Accession Number TCMCG002C12126
gbkey CDS
Protein Id XP_020093093.1
Location join(<5018394..5018534,5018747..5018923,5020151..5020244,5020453..5020565,5020684..5020806,5020907..5020978,5022027..5022119,5022247..5022360,5022473..5022595,5025005..5025190,5025330..5025404,5025792..5025928,5027299..5027436,5028132..5028271,5028365..5028430,5029839..5029945,5030101..5030181,5030259..5030333,5030415..5030516,5031872..5032040,5032124..5032257,5032458..5032541,5032652..5032752,5033370..5033523,5033619..5033693,5033788..5033938,5075911..5076499,5077416..5077476,5077878..5078023,5078101..5078284,5078359..5078457,5078603..5078988,5079072..5079248,5079969..5080065,5080141..5080296,5081270..5081500,5081587..5081670,5082392..5082499)
Gene LOC109713428
GeneID 109713428
Organism Ananas comosus

Protein

Length 1891aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA371634
db_source XM_020237504.1
Definition rRNA biogenesis protein RRP5, partial [Ananas comosus]

EGGNOG-MAPPER Annotation

COG_category A
Description Protein RRP5 homolog
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14792        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000460        [VIEW IN EMBL-EBI]
GO:0000462        [VIEW IN EMBL-EBI]
GO:0000466        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008134        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009553        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032040        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
AATATTGTACCAAATATGAAGCTTTTGGGAGTTATTGTTGAAGTAAACCCGAAAGACCTTGTAATCAGTCTTCCGGGAGGACTTAGAGGGTTTGTTCGTGCAGAGGAAGTATCTGACATTCCAACTGACGCTGAAAATAAGGGATCTGAAAGCAATGTGCTCTCTACCATTGTTTCCGTTGGCCAGCTTGTTCCTTGCGTGGTGTTACAGGTGGATGATGATAAGAAAGATGGAAAAGGAAACAAAAGAATTTGGCTGTCATTACGCTTAAGTTTGCTACATAAGGGCCTTTTACTAGATTCTGTTCAAGATGGAATGGTTCTTACTGCACAAGTAAAGAGTGTTGAGGACCATGGTTACATTCTTTATTTTGGAGTGTCTTCCTTTAGTGGCTTTATGCCAAGGAATGAAGAGGATGACATTCATAGGAGTGGACAACTATTACTGTGTGTTGTTAAAAGCATAGATAAAGCTCGGATGATCATTTATTTAAATCCAGATCGAGAGTTGGCATCGAAATCTTTTATAAAAGATCTCAGGGGGTTATCTATTGACCTTCTAGTTCCTGGCATGATGGTTAATGCTCGCGTTCATTCTACCCTAGAGAATGGGATAATGTTATCATTCCTTACTTATTTTACTGGAACAGTTGATATTTTTAATTTGGAAAACGTTTTTGCTGGTAGCACATGGAGAGATGAGTATACGACGAATAAGAAGGTGATTGCTCGGATCTTATTCGTGGATCCATCAAGTAGAGCTATTGGGCTTTCCTTGAACCGATTCCTGGTTCATAACAAGATACCTCCTACTCATGTCAAAACTGGGGAAATTTATGATTCTTCACGGGTACTAAGAATTGATAAAGGAGTTGGTCTTCTTCTTGAAATACCTTCTTCACCAGAGCCTTCACCGGCATATGTCAATATACGTGATATTTCTGATGAAGAAGTTGTGAAGTTGGAGAAAAAATTTAAAGAAGGTAGCACAGTTCGTGTTCGCATTCTTGGAGTGAGACATTTGGAAGGTCTTGCAGTAGGCACCTTAAAGGCTAGTGCTTTTGAAGGTTCAGTTTTCACTCATTCAGATGTTAAGCCTGGGATGTTGGTGAAAGCTAAGGTGATTGCTGTGGAAAGTTTTGGTGCTTTTGTACAGTTCTCAAGTGGTGTAAAAGCTCTTTGCCCTCTTCCACACATGTCAGAATTGGACATTGTGAAGCCACCTAAGAAGTTTAAGGTTGGAGCTGAGTTTCTTTTTCGTGTATTGGGTTGCAAATCCAAGCGAATTACTGTCACATACAAGAAGACTTTGGTTAAATCAAAGCTTGATGTGCTTGCTTCATATGCTGATGCTGCTGTAGGATTAGTAGCACATGGATGGATTACCAAAATTGAAAAACATGGCTGCTTCGTGAGATTTTATAATGGAGTCCAGGGTTACGCGCACAGATCTGAGCTTGGATTAGACCCTGGAAGTGAGGGAGAGAGTGTATATCACGTTGGACAAGTTGTTAAATGTAGAATAATTCAGTCAGCTCCTTCTGAGAGGAAAAGAGTCAGGGTTAGCTTGGTCATATCTCCTAAAAGGATTAGTGAGAACAAGGTTCCCAAGCTGGGAAGTCTTGTTTCTGGTGTTGTTAAGCGTCTGACTCCTACAGCAGTTATTGTTAATGTGAACGGTTGTTTGACAGGGACGATAGTTGATTACCACCTAACAGATCAGCAGGGGCAGGCCAATTTGATAAAGCCCCTGCTGAAGCCAGGTTATGAGTTTGATCAGCTTTTGGTGCTAGATATGGAGGGCAACAACATAGTTCTTTCGGCTAAGTATTCCCTCGTTAATACTGCTAAAGATATTCCTTTGGATGTTTCAGAGATTCAGAGTCAATCTGTTGTTCACGGCTACGTATGCAATATTATTGATAGCGGCTGTTTTGTTCGCTTTCTTGGGCGTTTGACTGGATTCTCACCGAAGCATAAAGTTGCTGATGAACAAATTGATGATATTTCCAAAGCGTTCTACGTTGGACAATCAGTTCGTAGTCATATCCTTAGTGTAGATGCTGGATCTGGTCGGATCAAACTCTCCTTACAGCAGTCTCTGTGCTTTTCATCTGATGTATCTTTTATTCAAGGATATTTTCTCATGGAGAAGAAGATAGCCGCACTGCAGTCTTCAAATGGTAAAGGTCCTGATCTTAATTGGTCGAAGAATTTCAGCATTGGCAGTCTGGTTGAGGGAGAGGTTGAAGAAATAAAAGAATTTGGCGTTGTCTTTAGCTTCAAAGGTCATAGTGATGTTGTTGGATTTGTTGCAAATCATCAATTGGGAGGAGCTGATGTTGAGGTCGGACTTGTTGTTAAAGCTTTTGTTCTGGACATAGCTATGTCTGATGGTCTTGTCGATTTATCCCTTAAACCTGAATTGGTTGGAAGTGCTAATTTGGATTTATTAAAGAAGAAGCGTCATCGAACTACTGCGTTGGACTTAAAGCTGCACCAAGAAGTGAATGCAGTTGTGGAACTTGTGAAAGAAAACTATTTGATTCTTTCAGTCCCAGAATATACCTACGCCATTGGATATGCCTCAATAACAGACTACAATGTGCAAAAGCTGCCTCACAAGCACTTCACAAATGGTCAAAGTGTCGTTGCAACTGTTGGGGCACTTTCAAGCCCTTACACTTCTGGAAGAGTTCTTTTATTACTCAAAACACTAGCTGATGTTTCGGGATCCGCTAGTTCTAAAAGGGCGAAGAAAAACTCCGGCTTAAAAGCTGGTTCTGTAGTTGAAGCAGAGATTATCGATATAAAGCCTCTGGAATTAATTTTGAAGTTTGGTACTGGAAATCGTGGGAGAGTTCATATAACTGATGTGCTTGATGATGACCATTCCATGGATAGTCCATTAAATAAATTTAAAATTGGGCAACTGGTTAACGCGCGAGTCGTTGCCAAGGTTAAGTCAGGGAAGAGTGGGAAGGGTTATCAGTGTGAGTTGTCTCTTAGACCATCTGTGCTTACAGGAATTATGGAAGAGATTGATCGTTCTATAAGTGAGTTCCAATTTTCTGTTGGTGAAGTCGTTAAAGGTTATGTTGTCAAGGTGGACAGCGAGTGGGTCTGGTTAACTGTGGCAAGAAATGTCATGGCCCATCTATTTTTTCTTGACACCTCTTGCGAACCAAAGGAACTTCAAAAATTCCAGCAACGCTTCAGTGTTGGTCAAGCCATCCAAGGACGCATCTTAACTGTAAACAAAGAGAAAAAATTGTTGAGGTTGTCGGTGATCAATCAGGAAGCGCTCAAGAAAAGTAGTCTGGAAACTAAAGATTCCAATATAGGTGGGAGTGAACATATAAATAGAGGTGATATTGTCGGTGGTCGAATTAAAAAGATTCTTCCTGGCATTGGTGGGATTCTTGTGCAGATTGGGCCTCATCTTTATGGGAGGGCTCATTATTCGGAGCTTCAAGTTGAATGGGTGCCTCAACCCTTAAATGGTTATGAGGAAGGGCAATTTGTCAAATGCAGGATCTTGGACATAAATCGTTCATCAGAGGGAACGGTACATGTTGATTTATCTCTGCGTTCATCTTCACAAGGCATTAATTTGGAAATGTGCAACAAGCGGATTGAGAAGATAGATGATCTTCATCCTAATATGGATGTTCAGGGTTATGTGAAGAATGTTACTTCTAAAGGTTGTTTTATTATGCTTTCTCGATCGATTGATGGTCGAATACTTTTGTCCAACTTGTCAAATGGATACATTGAAAACCCTGAAAAGGAGTTCCCAATAGGAAAGCTTGTTCATGGAAGGGTGCTAACTGTGGATCCTTCATCCAAGAAAGTTGAAGTGACACTGAAGACAGCAGCCGAAAATGGAGTGGGAAAATCTAGCATAGTTAGTTTCAGTGATTTTCATGTTGGTGATGTTATTCATGGACGAATAAGACGGACAGAGTCATATGGTTTGTTCATTACAATTGATGATAGCAACATGGTTGGTCTGTGCCATATATCGGAACTTTCTGATGAACCAATCGATGACATTGAAACTAGATATAAAGCCGGTGATAAAGTTGTGGCCAAAATCCTGAAGATTGATGCAGAAAGGCACCGAATATCCCTTGGTATGAAGAATTCATATTTTGGAGATGGCCGTGATCCTCAAATGGTTTCTAATGATGGTTCTGATGAAGATAATGTTGATGAAACTGCGACTGTGGATAACACATTGTTCCCTTTCCAGCAAAATAATAACTTAAGCTCAACCTCTAGGACATCTGGAGACAAAAATGGGGATTCTGCTCTCCTTGCTGAAGCAGAAATGAGAACTTCTGTTCTTCCTCTTCAAGTGTCTCTTGATGAATCAGAGGGTTCGGATTTAGATAATGAAGCAAACATCGAGCCTGTTACTATGAAAAGTACTGATATCACTGATAAAAAGAATGACAAGCGCATGAAGAAAAAGGCGAAGGAGCAAAGGGAACTTGAGATAAGTGCTTCTGAGGACAGGGCCTTGCAGAAGGATATTCCAAGGACTGCAGATGAATTTGAAAAATTGGTGCGAAGCTCCCCGAATAGTAGCTTTGTATGGATCAATTACATGGCATTCATGTTAGATATGGCAGACATCGAGAAAGCACGATCAATTGCTGAAAGGGCTCTGAGGACAATAAACATCAGAGAAGAAGAGGAGAAACTTAACATTTGGGTAGCATACTTCAATTTGGAAAATGAATATGGAAGTCCACCTGAGGAGGCAGTTAAGAAGACCTTCCAAAGAGCATTGCAGTTCTGTGATCCAAAGAAGTTGTATCTCGCTCTTCTTGGGATGTATGAGAGGACTGAACAGCACAAGCTGGCTGAAGAGCTGCTTGAGAGAATGGTCAAGAAGTTCAAAACCTCGTGCAAGGTTTGGTTACGTTTTGTTCAGAACTTCCTAAAGCAAGGCAAAGATGGCGTTCAGTCTATAGTCAACCGTGCTCTTCTTAGTTTGCACCGTCACAAGCATATAAAATTCATCTCACAGGCAGCCATTCTTGAATTCAAGTGTGGCGTACCAGATAGAGGAAGATCCATGTTCGAAGGTATTTTGCGTGAGTATCCAAAAAGAACTGATCTATGGAGCATTTATCTGGATCAGGAAATTCGAGTTGGTGACACTGAAGTGATTCGGGCCTTGTTTGAGAGGGCGACTTGTCTAAGTCTTCCACCTAAAAAGATGAAGTTCCTATTTAAAAAGTACCTAGAATATGAAAAGACCCGAGGCGACGAAGAAAGGATCGAACATGTAAAGAGGAAGGCACTGGAATACGTGGAGAACTCACTAGCATGA
Protein:  
GGGGGEGPLPPHKPFKKPRKDAAELPPSLLTADDDPDFPRGGGSVLSRKEAAEARAEAESEFEREERSKGKKKKKKGARRSLGEADEDFGSLFGEGVTGKLPRFANRITLKNIVPNMKLLGVIVEVNPKDLVISLPGGLRGFVRAEEVSDIPTDAENKGSESNVLSTIVSVGQLVPCVVLQVDDDKKDGKGNKRIWLSLRLSLLHKGLLLDSVQDGMVLTAQVKSVEDHGYILYFGVSSFSGFMPRNEEDDIHRSGQLLLCVVKSIDKARMIIYLNPDRELASKSFIKDLRGLSIDLLVPGMMVNARVHSTLENGIMLSFLTYFTGTVDIFNLENVFAGSTWRDEYTTNKKVIARILFVDPSSRAIGLSLNRFLVHNKIPPTHVKTGEIYDSSRVLRIDKGVGLLLEIPSSPEPSPAYVNIRDISDEEVVKLEKKFKEGSTVRVRILGVRHLEGLAVGTLKASAFEGSVFTHSDVKPGMLVKAKVIAVESFGAFVQFSSGVKALCPLPHMSELDIVKPPKKFKVGAEFLFRVLGCKSKRITVTYKKTLVKSKLDVLASYADAAVGLVAHGWITKIEKHGCFVRFYNGVQGYAHRSELGLDPGSEGESVYHVGQVVKCRIIQSAPSERKRVRVSLVISPKRISENKVPKLGSLVSGVVKRLTPTAVIVNVNGCLTGTIVDYHLTDQQGQANLIKPLLKPGYEFDQLLVLDMEGNNIVLSAKYSLVNTAKDIPLDVSEIQSQSVVHGYVCNIIDSGCFVRFLGRLTGFSPKHKVADEQIDDISKAFYVGQSVRSHILSVDAGSGRIKLSLQQSLCFSSDVSFIQGYFLMEKKIAALQSSNGKGPDLNWSKNFSIGSLVEGEVEEIKEFGVVFSFKGHSDVVGFVANHQLGGADVEVGLVVKAFVLDIAMSDGLVDLSLKPELVGSANLDLLKKKRHRTTALDLKLHQEVNAVVELVKENYLILSVPEYTYAIGYASITDYNVQKLPHKHFTNGQSVVATVGALSSPYTSGRVLLLLKTLADVSGSASSKRAKKNSGLKAGSVVEAEIIDIKPLELILKFGTGNRGRVHITDVLDDDHSMDSPLNKFKIGQLVNARVVAKVKSGKSGKGYQCELSLRPSVLTGIMEEIDRSISEFQFSVGEVVKGYVVKVDSEWVWLTVARNVMAHLFFLDTSCEPKELQKFQQRFSVGQAIQGRILTVNKEKKLLRLSVINQEALKKSSLETKDSNIGGSEHINRGDIVGGRIKKILPGIGGILVQIGPHLYGRAHYSELQVEWVPQPLNGYEEGQFVKCRILDINRSSEGTVHVDLSLRSSSQGINLEMCNKRIEKIDDLHPNMDVQGYVKNVTSKGCFIMLSRSIDGRILLSNLSNGYIENPEKEFPIGKLVHGRVLTVDPSSKKVEVTLKTAAENGVGKSSIVSFSDFHVGDVIHGRIRRTESYGLFITIDDSNMVGLCHISELSDEPIDDIETRYKAGDKVVAKILKIDAERHRISLGMKNSYFGDGRDPQMVSNDGSDEDNVDETATVDNTLFPFQQNNNLSSTSRTSGDKNGDSALLAEAEMRTSVLPLQVSLDESEGSDLDNEANIEPVTMKSTDITDKKNDKRMKKKAKEQRELEISASEDRALQKDIPRTADEFEKLVRSSPNSSFVWINYMAFMLDMADIEKARSIAERALRTINIREEEEKLNIWVAYFNLENEYGSPPEEAVKKTFQRALQFCDPKKLYLALLGMYERTEQHKLAEELLERMVKKFKTSCKVWLRFVQNFLKQGKDGVQSIVNRALLSLHRHKHIKFISQAAILEFKCGVPDRGRSMFEGILREYPKRTDLWSIYLDQEIRVGDTEVIRALFERATCLSLPPKKMKFLFKKYLEYEKTRGDEERIEHVKRKALEYVENSLA